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Author Topic: Finally calibrating the "molecular clock"?  (Read 911 times)
Jacques Cinq-Mars
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« on: April 28, 2004, 10:26:45 AM »

All,

There might be hope!

By the way, this info was just posted by M. Brass, on the Palanthsci list.  Anyone interested in exploring Quantitative Biology for more of the same, i.e., palaeoanthropologically relevant material, should click HERE. Note that, once there, a bit of clicking will also give you access to a downloadable PDF version of the actual (Gillooly & al.) article.

Jacques Cinq-Mars

Quote
Quantitative Biology, abstract
q-bio.PE/0404027

From: James Gillooly
Date: Thu, 22 Apr 2004

Metabolic Rate Calibrates the Molecular Clock: Reconciling Molecular and Fossil Estimates of Evolutionary Divergence
Authors: James F. Gillooly, Andrew P. Allen, Geoffrey B. West, James H. Brown.

Subj-class: Populations and Evolution; Genomics.


Abstract:

Observations that rates of molecular evolution vary widely within and among lineages have cast doubts upon the existence of a single molecular clock. Differences in the timing of evolutionary events estimated from genetic and fossil evidence have raised further questions about the existence of molecular clocks and their use. Here we present a model of nucleotide substitution that combines new theory on metabolic rate with the now classic neutral theory of molecular evolution. The model quantitatively predicts rate heterogeneity, and reconciles differences in molecular- and fossil-estimated dates of evolutionary events. Model predictions are supported by extensive data from mitochondrial and nuclear genomes. By accounting for the effects of body size and temperature on metabolic rate, a single molecular clock explains heterogeneity in rates of nucleotide substitution in different genes, taxa, and thermal environments. This model suggests that there is indeed a general molecular clock, as originally proposed by Zuckerkandl and Pauling, but that it ticks at a constant substitution rate per unit mass-specific metabolic energy rather than per unit time. More generally, the model suggests that body size and temperature combine to control the overall rate of evolution through their effects on metabolism.

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Mikey Brass
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« Reply #1 on: April 28, 2004, 05:48:21 PM »

All,

There might be hope!

By the way, this info was just posted by M. Brass, on the Palanthsci list.  Anyone interested in exploring Quantitative Biology for more of the same, i.e., palaeoanthropologically relevant material, should click HERE. Note that, once there, a bit of clicking will also give you access to a downloadable PDF version of the actual (Gillooly & al.) article.

Jacques Cinq-Mars

Thanks for the mention of my name and thanks to for the information to download the pdf. Just done. I haven't been around here really in the last two months - I haven't really been able to spare time outside of a couple of lists. My final essays will soon be out of the way and onto my dissertation, so hopefully my participation here can increase as well. I am interested in the latest issue of the Journal of Anthropological Research, in all the articles. I hope to obtain them shortly. Fiedel's support of the "Clovis-first" model is puzzling in light of the dates emerging from South America, from Monte Verde and from Meadowcraft; I wonder how he deals with them...
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Best, Mikey Brass
Ph.D. student, Institute of Archaeology, UCL
Website: http://www.antiquityofman.com

- !ke e: /xarra //ke
("Diverse people unite": Motto of the South African Coat of Arms, 2002)
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